How-To Guides

Our How-To guides will help you navigate trough out data repository (NFDI4Immuno Data Portal) as well as our supplementary data-analysis tools. 

NFDI4Immuno Data Portal

The Basics

First Orientation – Learn how to navigate though the general structure of the NFDI4Immuno Data Portal

Data Submission

Learn how to upload data to the NFDI4Immuno Data Portal

Data Request & Download

Learn how to request access to data from the repository and how to download them after acceptance.

Analysis Tools

V-gene sequence analysis

This tool helps analyzing B cell receptor sequence data originating in the Invivoscribe LymphoTrack® IGHV Assays. The output: clonal composition, mutation frequencies & CDR-III length. It can directly be used with the IgTree® software to generate phylogenies from each clone.

nf-core/airrflow

nf-core/airrflow is a best-practice pipeline for analyzing BCR and TCR repertoire sequencing data from targeted or untargeted bulk and single-cell RNA-seq, enabling end-to-end processing from raw reads to clonal inference and repertoire analysis.

Workshops

Learn more within our online workshops.

Process and Analyze Data

Explore what’s beyond – learn how to apply our open-source pipelines to analyze your AIRR-Seq*- and Flow-data.